Hi, RickLH,
Based on my understanding, your Setup Project adds all your application files into the Startup Menu, doesn't it?
I think this is because you added the files into the wrong folder in your Setup Project.
In fact, there would be three standardfolders in the "File System" View in your Setup Project.
Application Folder is for "Program Files" folder, User's Desktop is for your desktop and the User's Programs Menu is for your Startup Menu.
I guess you just add the project output to your User's Programs Menu, don't you?
You should just remove it and add the Has.exe only through "Add->File..."
Hope this helps,
Regards